Package overview

photobiologyInOut-package

photobiologyInOut: Read Spectral and Logged Data from Foreign Files

Spectrometer output files

Read files with data from spectrometers.

read_oo_ssirrad() read_oo_ssdata()

Read File Saved by Ocean Optics' SpectraSuite.

read_oo_jazirrad() read_oo_jazpc() read_oo_jazdata()

Read Files Saved by Ocean Optics' Jaz spectrometer.

read_oo_pidata()

Read File Saved by Ocean Optics' Raspberry Pi software.

read_avaspec_csv() read_avaspec_xls()

Read '.csv' File Saved by Avantes' Software for AvaSpec.

read_macam_dta()

Read '.DTA' File Saved by Macam's Software.

read_licor_prn() read_m_licor_prn()

Read '.PRN' File(s) Saved by LI-COR's PC1800 Program.

Data from loggers

Read files with data from loggers.

read_csi_dat()

Read '.DAT' file(s) saved by modern Campbell Scientific loggers.

read_yoctopuce_csv()

Read '.CSV' file(s) dowloaded from YoctoPuce modules.

Data from models.

Read files with data from radiation transfer models.

read_fmi_cum() read_m_fmi_cum()

Read daily cummulated solar spectrum data file(s).

read_fmi2mspct()

Read multiple solar spectra from a data file.

read_tuv_usrout() read_tuv_usrout2mspct()

Read TUV output file.

read_qtuv_txt()

Read Quick TUV output file.

read_uvspec_disort()

Read libRadtran's uvspec output file.

read_uvspec_disort_vesa()

Read libRadtran's uvspec output file from batch job.

Data from repositories.

Read files with data downloaded from public repositories.

read_FReD_csv()

Read '.CSV' FReD database.

read_ASTER_txt()

Read File downloaded from ASTER data base.

Data from other R packages.

Read and write to objects belonging to classes defined in other R packages.

hyperSpec2mspct() hyperSpec2spct() mspct2hyperSpec() spct2hyperSpec()

Convert 'hyperSpec::hyperSpec' objects

colorSpec2mspct() as.source_spct(<colorSpec>) as.source_mspct(<colorSpec>) as.response_spct(<colorSpec>) as.response_mspct(<colorSpec>) as.filter_spct(<colorSpec>) as.filter_mspct(<colorSpec>) as.reflector_spct(<colorSpec>) as.reflector_mspct(<colorSpec>) as.chroma_mspct(<colorSpec>) colorSpec2spct() colorSpec2chroma_spct() as.chroma_spct(<colorSpec>) as.chroma_mspct(<colorSpec>) mspct2colorSpec() spct2colorSpec() chroma_spct2colorSpec()

Convert 'colorSpec::colorSpec' objects

rspec2mspct() rspec2spct()

Convert "pavo::rspec" objects

as.colorSpec(<generic_mspct>) as.colorSpec(<generic_spct>) as.colorSpec(<chroma_spct>)

Convert into 'colorSpec::colorSpec' objects

as.generic_spct(<colorSpec>)

Coerce into generic_spct

as.generic_mspct(<colorSpec>)

Convert into generic_mspct