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Pfr Sigma as a function of wavelength, calculated by interpolation from data for Type I Phytochrome as compiled by Mancinelli (1994).

Usage

Phy_Sigma_FR(w.length, use.cached.mult = FALSE)

Arguments

w.length

numeric array of wavelength (nm)

use.cached.mult

logical ignored

Value

a numeric array with values for Sigma

References

Mancinelli, A.L. (1994) The physiology of phytochrome action. In Photomorphogenesis in plants, 2nd edition. R.E. Kendrick and G.H.M. Kronenberg, eds. Kluwer Academic Publishers, Dordrecht, pp. 211-269. ISBN 978-0-7923-2551-2 (print), 978-94-011-1884-2 (on-line). doi:10.1007/978-94-011-1884-2_10

Examples

with(sun.spct, Phy_Sigma_FR(w.length))
#>   [1]         NA         NA         NA         NA         NA         NA
#>   [7]         NA         NA         NA         NA         NA         NA
#>  [13]         NA         NA         NA         NA         NA         NA
#>  [19]         NA         NA         NA  728.30000  706.92645  687.07494
#>  [25]  668.65916  651.59281  635.78959  621.16321  607.62736  595.09574
#>  [31]  583.48205  572.70000  562.65265  553.20053  544.19354  535.48159
#>  [37]  526.91457  518.34238  509.61494  500.58212  491.09384  481.00000
#>  [43]  470.20366  458.82055  447.01958  434.96964  422.83963  410.79845
#>  [49]  399.01500  387.65818  376.89688  366.90000  357.80441  349.61885
#>  [55]  342.32003  335.88464  330.28940  325.51100  321.52616  318.31157
#>  [61]  315.84395  314.10000  313.05309  312.66323  312.88710  313.68139
#>  [67]  315.00278  316.80795  319.05357  321.69634  324.69292  328.00000
#>  [73]  331.58254  335.43864  339.57466  343.99698  348.71197  353.72600
#>  [79]  359.04545  364.67668  370.62608  376.90000  383.49684  390.38301
#>  [85]  397.51694  404.85707  412.36182  419.98963  427.69892  435.44813
#>  [91]  443.19568  450.90000  458.52911  466.08933  473.59656  481.06673
#>  [97]  488.51573  495.95947  503.41386  510.89481  518.41822  526.00000
#> [103]  533.64713  541.33089  549.01360  556.65761  564.22526  571.67889
#> [109]  578.98084  586.09345  592.97905  599.60000  605.92626  611.95833
#> [115]  617.70434  623.17243  628.37073  633.30737  637.99049  642.42821
#> [121]  646.62867  650.60000  654.32913  657.71820  660.64813  662.99986
#> [127]  664.65431  665.49241  665.39511  664.24331  661.91797  658.30000
#> [133]  653.30521  646.98887  639.44113  630.75214  621.01204  610.31097
#> [139]  598.73909  586.38653  573.34346  559.70000  545.54523  530.96392
#> [145]  516.03974  500.85639  485.49755  470.04691  454.58814  439.20495
#> [151]  423.98100  409.00000  394.33536  380.01945  366.07439  352.52229
#> [157]  339.38526  326.68541  314.44484  302.68568  291.43003  280.70000
#> [163]  270.50913  260.83667  251.65328  242.92964  234.63641  226.74427
#> [169]  219.22389  212.04594  205.18108  198.60000  192.27751  186.20508
#> [175]  180.37829  174.79276  169.44410  164.32792  159.43980  154.77538
#> [181]  150.33024  146.10000  142.07901  138.25663  134.62096  131.16011
#> [187]  127.86217  124.71527  121.70749  118.82695  116.06175  113.40000
#> [193]  110.83189  108.35601  105.97302  103.68361  101.48845   99.38821
#> [199]   97.38357   95.47521   93.66379   91.95000   90.33342   88.80927
#> [205]   87.37169   86.01482   84.73279   83.51973   82.36979   81.27710
#> [211]   80.23579   79.24000   78.28489   77.36972   76.49477   75.66032
#> [217]   74.86666   74.11406   73.40282   72.73320   72.10550   71.52000
#> [223]   70.97632   70.47145   70.00173   69.56349   69.15307   68.76681
#> [229]   68.40104   68.05209   67.71630   67.39000   67.07040   66.75817
#> [235]   66.45484   66.16195   65.88105   65.61366   65.36132   65.12557
#> [241]   64.90795   64.71000   64.53303   64.37748   64.24356   64.13149
#> [247]   64.04149   63.97376   63.92854   63.90603   63.90644   63.93000
#> [253]   63.97725   64.05008   64.15071   64.28136   64.44425   64.64160
#> [259]   64.87563   65.14856   65.46261   65.82000   66.22244   66.66963
#> [265]   67.16074   67.69497   68.27149   68.88950   69.54817   70.24668
#> [271]   70.98423   71.76000   72.57346   73.42524   74.31627   75.24747
#> [277]   76.21977   77.23409   78.29134   79.39247   80.53838   81.73000
#> [283]   82.96863   84.25709   85.59854   86.99617   88.45317   89.97271
#> [289]   91.55799   93.21217   94.93845   96.74000   98.61951  100.57769
#> [295]  102.61475  104.73088  106.92630  109.20122  111.55584  113.99037
#> [301]  116.50502  119.10000  121.77590  124.53486  127.37940  130.31207
#> [307]  133.33537  136.45185  139.66402  142.97442  146.38557  149.90000
#> [313]  153.51906  157.23936  161.05636  164.96550  168.96221  173.04195
#> [319]  177.20015  181.43227  185.73374  190.10000  194.52788  199.01970
#> [325]  203.57916  208.20995  212.91579  217.70036  222.56737  227.52051
#> [331]  232.56349  237.70000  242.93522  248.28024  253.74761  259.34989
#> [337]  265.09964  271.00942  277.09179  283.35930  289.82452  296.50000
#> [343]  303.39692  310.52093  317.87630  325.46728  333.29815  341.37316
#> [349]  349.69659  358.27269  367.10574  376.20000  385.55928  395.18562
#> [355]  405.08059  415.24578  425.68277  436.39313  447.37846  458.64032
#> [361]  470.18031  482.00000  494.09594  506.44458  519.01733  531.78559
#> [367]  544.72078  557.79430  570.97757  584.24201  597.55901  610.90000
#> [373]  624.24094  637.57605  650.90410  664.22387  677.53413  690.83366
#> [379]  704.12124  717.39564  730.65563  743.90000  757.10265  770.13808
#> [385]  782.85590  795.10575  806.73724  817.60000  827.60840  836.93581
#> [391]  845.82030  854.50000  863.17628  871.90367  880.69997  889.58301
#> [397]  898.57059  907.68052  916.93062  926.33869  935.92255  945.70000
#> [403]  955.69182  965.93062  976.45195  987.29139  998.48451 1010.06686
#> [409] 1022.07402 1034.54155 1047.50502 1061.00000 1075.05204 1089.64667
#> [415] 1104.75943 1120.36582 1136.44138 1152.96163 1169.90209 1187.23829
#> [421] 1204.94575 1223.00000 1241.37532 1260.04109 1278.96545 1298.11653
#> [427] 1317.46247 1336.97141 1356.61150 1376.35087 1396.15766 1416.00000
#> [433] 1435.83867 1455.60496 1475.22279 1494.61608 1513.70874 1532.42471
#> [439] 1550.68790 1568.42223 1585.55162 1602.00000 1617.67999 1632.45906
#> [445] 1646.19340 1658.73917 1669.95256 1679.68975 1687.80690 1694.16021
#> [451] 1698.60585 1701.00000 1701.21036 1699.15078 1694.74662 1687.92324
#> [457] 1678.60601 1666.72031 1652.19149 1634.94492 1614.90597 1592.00000
#> [463] 1566.20055 1537.67381 1506.63413 1473.29587 1437.87338 1400.58102
#> [469] 1361.63315 1321.24412 1279.62828 1237.00000 1193.56613 1149.50358
#> [475] 1104.98177 1060.17009 1015.23796  970.35480  925.69001  881.41301
#> [481]  837.69320  794.70000  752.60432  711.58305  671.81461  633.47738
#> [487]  596.74977  561.81018  528.83701  498.00865  469.50352  443.50000
#> [493]         NA         NA         NA         NA         NA         NA
#> [499]         NA         NA         NA         NA         NA         NA
#> [505]         NA         NA         NA         NA         NA         NA
#> [511]         NA         NA         NA         NA         NA         NA
#> [517]         NA         NA         NA         NA         NA         NA
with(sun.spct, Phy_Sigma_FR(w.length, TRUE))
#>   [1]         NA         NA         NA         NA         NA         NA
#>   [7]         NA         NA         NA         NA         NA         NA
#>  [13]         NA         NA         NA         NA         NA         NA
#>  [19]         NA         NA         NA  728.30000  706.92645  687.07494
#>  [25]  668.65916  651.59281  635.78959  621.16321  607.62736  595.09574
#>  [31]  583.48205  572.70000  562.65265  553.20053  544.19354  535.48159
#>  [37]  526.91457  518.34238  509.61494  500.58212  491.09384  481.00000
#>  [43]  470.20366  458.82055  447.01958  434.96964  422.83963  410.79845
#>  [49]  399.01500  387.65818  376.89688  366.90000  357.80441  349.61885
#>  [55]  342.32003  335.88464  330.28940  325.51100  321.52616  318.31157
#>  [61]  315.84395  314.10000  313.05309  312.66323  312.88710  313.68139
#>  [67]  315.00278  316.80795  319.05357  321.69634  324.69292  328.00000
#>  [73]  331.58254  335.43864  339.57466  343.99698  348.71197  353.72600
#>  [79]  359.04545  364.67668  370.62608  376.90000  383.49684  390.38301
#>  [85]  397.51694  404.85707  412.36182  419.98963  427.69892  435.44813
#>  [91]  443.19568  450.90000  458.52911  466.08933  473.59656  481.06673
#>  [97]  488.51573  495.95947  503.41386  510.89481  518.41822  526.00000
#> [103]  533.64713  541.33089  549.01360  556.65761  564.22526  571.67889
#> [109]  578.98084  586.09345  592.97905  599.60000  605.92626  611.95833
#> [115]  617.70434  623.17243  628.37073  633.30737  637.99049  642.42821
#> [121]  646.62867  650.60000  654.32913  657.71820  660.64813  662.99986
#> [127]  664.65431  665.49241  665.39511  664.24331  661.91797  658.30000
#> [133]  653.30521  646.98887  639.44113  630.75214  621.01204  610.31097
#> [139]  598.73909  586.38653  573.34346  559.70000  545.54523  530.96392
#> [145]  516.03974  500.85639  485.49755  470.04691  454.58814  439.20495
#> [151]  423.98100  409.00000  394.33536  380.01945  366.07439  352.52229
#> [157]  339.38526  326.68541  314.44484  302.68568  291.43003  280.70000
#> [163]  270.50913  260.83667  251.65328  242.92964  234.63641  226.74427
#> [169]  219.22389  212.04594  205.18108  198.60000  192.27751  186.20508
#> [175]  180.37829  174.79276  169.44410  164.32792  159.43980  154.77538
#> [181]  150.33024  146.10000  142.07901  138.25663  134.62096  131.16011
#> [187]  127.86217  124.71527  121.70749  118.82695  116.06175  113.40000
#> [193]  110.83189  108.35601  105.97302  103.68361  101.48845   99.38821
#> [199]   97.38357   95.47521   93.66379   91.95000   90.33342   88.80927
#> [205]   87.37169   86.01482   84.73279   83.51973   82.36979   81.27710
#> [211]   80.23579   79.24000   78.28489   77.36972   76.49477   75.66032
#> [217]   74.86666   74.11406   73.40282   72.73320   72.10550   71.52000
#> [223]   70.97632   70.47145   70.00173   69.56349   69.15307   68.76681
#> [229]   68.40104   68.05209   67.71630   67.39000   67.07040   66.75817
#> [235]   66.45484   66.16195   65.88105   65.61366   65.36132   65.12557
#> [241]   64.90795   64.71000   64.53303   64.37748   64.24356   64.13149
#> [247]   64.04149   63.97376   63.92854   63.90603   63.90644   63.93000
#> [253]   63.97725   64.05008   64.15071   64.28136   64.44425   64.64160
#> [259]   64.87563   65.14856   65.46261   65.82000   66.22244   66.66963
#> [265]   67.16074   67.69497   68.27149   68.88950   69.54817   70.24668
#> [271]   70.98423   71.76000   72.57346   73.42524   74.31627   75.24747
#> [277]   76.21977   77.23409   78.29134   79.39247   80.53838   81.73000
#> [283]   82.96863   84.25709   85.59854   86.99617   88.45317   89.97271
#> [289]   91.55799   93.21217   94.93845   96.74000   98.61951  100.57769
#> [295]  102.61475  104.73088  106.92630  109.20122  111.55584  113.99037
#> [301]  116.50502  119.10000  121.77590  124.53486  127.37940  130.31207
#> [307]  133.33537  136.45185  139.66402  142.97442  146.38557  149.90000
#> [313]  153.51906  157.23936  161.05636  164.96550  168.96221  173.04195
#> [319]  177.20015  181.43227  185.73374  190.10000  194.52788  199.01970
#> [325]  203.57916  208.20995  212.91579  217.70036  222.56737  227.52051
#> [331]  232.56349  237.70000  242.93522  248.28024  253.74761  259.34989
#> [337]  265.09964  271.00942  277.09179  283.35930  289.82452  296.50000
#> [343]  303.39692  310.52093  317.87630  325.46728  333.29815  341.37316
#> [349]  349.69659  358.27269  367.10574  376.20000  385.55928  395.18562
#> [355]  405.08059  415.24578  425.68277  436.39313  447.37846  458.64032
#> [361]  470.18031  482.00000  494.09594  506.44458  519.01733  531.78559
#> [367]  544.72078  557.79430  570.97757  584.24201  597.55901  610.90000
#> [373]  624.24094  637.57605  650.90410  664.22387  677.53413  690.83366
#> [379]  704.12124  717.39564  730.65563  743.90000  757.10265  770.13808
#> [385]  782.85590  795.10575  806.73724  817.60000  827.60840  836.93581
#> [391]  845.82030  854.50000  863.17628  871.90367  880.69997  889.58301
#> [397]  898.57059  907.68052  916.93062  926.33869  935.92255  945.70000
#> [403]  955.69182  965.93062  976.45195  987.29139  998.48451 1010.06686
#> [409] 1022.07402 1034.54155 1047.50502 1061.00000 1075.05204 1089.64667
#> [415] 1104.75943 1120.36582 1136.44138 1152.96163 1169.90209 1187.23829
#> [421] 1204.94575 1223.00000 1241.37532 1260.04109 1278.96545 1298.11653
#> [427] 1317.46247 1336.97141 1356.61150 1376.35087 1396.15766 1416.00000
#> [433] 1435.83867 1455.60496 1475.22279 1494.61608 1513.70874 1532.42471
#> [439] 1550.68790 1568.42223 1585.55162 1602.00000 1617.67999 1632.45906
#> [445] 1646.19340 1658.73917 1669.95256 1679.68975 1687.80690 1694.16021
#> [451] 1698.60585 1701.00000 1701.21036 1699.15078 1694.74662 1687.92324
#> [457] 1678.60601 1666.72031 1652.19149 1634.94492 1614.90597 1592.00000
#> [463] 1566.20055 1537.67381 1506.63413 1473.29587 1437.87338 1400.58102
#> [469] 1361.63315 1321.24412 1279.62828 1237.00000 1193.56613 1149.50358
#> [475] 1104.98177 1060.17009 1015.23796  970.35480  925.69001  881.41301
#> [481]  837.69320  794.70000  752.60432  711.58305  671.81461  633.47738
#> [487]  596.74977  561.81018  528.83701  498.00865  469.50352  443.50000
#> [493]         NA         NA         NA         NA         NA         NA
#> [499]         NA         NA         NA         NA         NA         NA
#> [505]         NA         NA         NA         NA         NA         NA
#> [511]         NA         NA         NA         NA         NA         NA
#> [517]         NA         NA         NA         NA         NA         NA